Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AARI_02880 | AARI_06670 | AARI_02880 | AARI_06670 | AraC-family transcriptional regulator; Identified by match to protein domain PF00165: bacterial regulatory helix-turn-helix proteins, AraC family. | Presence of one conserved barrel domain of the cupin superfamily (PF07883). | 0.486 |
| AARI_06640 | AARI_06670 | AARI_06640 | AARI_06670 | Putative Crp/Fnr-family transcriptional regulator; Cd00038: effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. | Presence of one conserved barrel domain of the cupin superfamily (PF07883). | 0.435 |
| AARI_06640 | copA | AARI_06640 | AARI_06660 | Putative Crp/Fnr-family transcriptional regulator; Cd00038: effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. | Copper-exporting ATPase CopA; Involved in copper export. Forms an heterodimer with CopZ during the transfer of Cu(+). TCDB: P-type ATPase (P-ATPase) superfamily (TC 3.A.3.y.z). Identified by similarity to protein SP:O32220 (Bacillus subtilis). | 0.717 |
| AARI_06670 | AARI_02880 | AARI_06670 | AARI_02880 | Presence of one conserved barrel domain of the cupin superfamily (PF07883). | AraC-family transcriptional regulator; Identified by match to protein domain PF00165: bacterial regulatory helix-turn-helix proteins, AraC family. | 0.486 |
| AARI_06670 | AARI_06640 | AARI_06670 | AARI_06640 | Presence of one conserved barrel domain of the cupin superfamily (PF07883). | Putative Crp/Fnr-family transcriptional regulator; Cd00038: effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. | 0.435 |
| AARI_06670 | copA | AARI_06670 | AARI_06660 | Presence of one conserved barrel domain of the cupin superfamily (PF07883). | Copper-exporting ATPase CopA; Involved in copper export. Forms an heterodimer with CopZ during the transfer of Cu(+). TCDB: P-type ATPase (P-ATPase) superfamily (TC 3.A.3.y.z). Identified by similarity to protein SP:O32220 (Bacillus subtilis). | 0.599 |
| copA | AARI_06640 | AARI_06660 | AARI_06640 | Copper-exporting ATPase CopA; Involved in copper export. Forms an heterodimer with CopZ during the transfer of Cu(+). TCDB: P-type ATPase (P-ATPase) superfamily (TC 3.A.3.y.z). Identified by similarity to protein SP:O32220 (Bacillus subtilis). | Putative Crp/Fnr-family transcriptional regulator; Cd00038: effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. | 0.717 |
| copA | AARI_06670 | AARI_06660 | AARI_06670 | Copper-exporting ATPase CopA; Involved in copper export. Forms an heterodimer with CopZ during the transfer of Cu(+). TCDB: P-type ATPase (P-ATPase) superfamily (TC 3.A.3.y.z). Identified by similarity to protein SP:O32220 (Bacillus subtilis). | Presence of one conserved barrel domain of the cupin superfamily (PF07883). | 0.599 |