STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_06810Putative mobilisation protein; Identified by match to protein family PF03432: Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. (571 aa)    
Predicted Functional Partners:
AARI_06800
Putative mobilisation protein; Identified by match to protein family PF05713: bacterial mobilisation protein (MobC). This family consists of several bacterial MobC-like, mobilisation proteins. MobC proteins belong to the group of relaxases. Together with MobA and MobB they bind to a single cis- active site of a mobilising plasmid, the origin of transfer (oriT) region.
       0.785
AARI_30070
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
   
 0.780
AARI_06860
5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.778
AARI_30060
Identified by match to protein family PF02534. The TraG family are bacterial conjugation proteins. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome.
 
   
 0.776
AARI_30080
Conserved hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0.
  
     0.769
AARI_06820
Conserved hypothetical protein; Similar to Arthrobacter plasmidic proteins.
       0.759
AARI_30090
Hypothetical membrane protein; 7 transmembrane helices predicted by TMHMM2.0.
  
     0.752
AARI_30170
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.724
dnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.690
AARI_19690
5.2 Protein of unknown function similar to proteins from other organisms.
  
 
 0.679
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.