STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatAaspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (512 aa)    
Predicted Functional Partners:
gatC
aspartyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
 
 0.999
gatB
aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
 0.999
gltX
glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
  
 
 0.769
aspS
aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
 
 
 0.749
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.746
gluQ
Putative glutamate--tRNA ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
  
 
 0.724
accA
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Enzymes named acetyl-coenzyme A carboxylase (EC 6.4. 1.2), propionyl-coenzyme A carboxylase (EC 6.4.1.3) and acyl-coenzyme A carboxylase are constituted by several types of subunits. Alpha subunits contains the biotin carboxylase (BC, EC 6.3.4.14) and biotin carboxyl carrier protein (BCCP) domains, beta subunits contain the carboxyltransferase (CT) domain. An epsilon subunit is present in some microorganisms.
    
 0.710
carB
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit; Carbamoyl-phosphate synthase is involved in both arginine and pyrimidine biosynthesis and catalyzes the ATP-dependent formation of carbamoyl-phosphate from glutamine and carbon dioxide. In bacteria it is composed of two subunits: a large chain (gene carB) and a small chain (gene carA); Belongs to the CarB family.
   
 
 0.698
AARI_06380
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Enzymes named acetyl-coenzyme A carboxylase (EC 6.4. 1.2), propionyl-coenzyme A carboxylase (EC 6.4.1.3) and acyl-coenzyme A carboxylase are constituted by several types of subunits. Alpha subunits contains the biotin carboxylase (BC, EC 6.3.4.14) and biotin carboxyl carrier protein (BCCP) domains, beta subunits contain the carboxyltransferase (CT) domain. An epsilon subunit is present in some microorganisms.
    
 0.689
AARI_08310
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Enzymes named acetyl-coenzyme A carboxylase (EC 6.4. 1.2), propionyl-coenzyme A carboxylase (EC 6.4.1.3) and acyl-coenzyme A carboxylase are constituted by several types of subunits. Alpha subunits contains the biotin carboxylase (BC, EC 6.3.4.14) and biotin carboxyl carrier protein (BCCP) domains, beta subunits contain the carboxyltransferase (CT) domain. An epsilon subunit is present in some microorganisms.
    
 0.649
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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