STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_09690Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. (190 aa)    
Predicted Functional Partners:
AARI_12830
Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0.
  
     0.764
AARI_21350
Aminoglycoside phosphotransferase-like protein; Identified by match to PF01636. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides. It also includes homoserine kinase.
  
     0.760
AARI_22520
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.723
AARI_20670
DivIVA family protein; Match to PF05103.
  
     0.709
AARI_05510
Conserved hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0.
  
     0.671
AARI_25670
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.656
AARI_01660
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.643
rpsD
30S ribosomal protein S20; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
     0.634
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.625
cdsA
Phosphatidate cytidylyltransferase catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate. It produces key intermediates in phospholipid biosynthesis; Belongs to the CDS family.
       0.625
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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