Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AARI_05260 | AARI_09750 | AARI_05260 | AARI_09750 | Protein-histidine kinases are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions. | Protein-histidine kinases are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions. 1 transmembrane helice predicted by TMHMM2.0. | 0.786 |
| AARI_09700 | AARI_09710 | AARI_09700 | AARI_09710 | Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | 0.814 |
| AARI_09700 | AARI_09720 | AARI_09700 | AARI_09720 | Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.516 |
| AARI_09700 | AARI_09730 | AARI_09700 | AARI_09730 | Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0. | 0.516 |
| AARI_09700 | AARI_09740 | AARI_09700 | AARI_09740 | Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | Response regulators are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions. | 0.497 |
| AARI_09700 | AARI_09750 | AARI_09700 | AARI_09750 | Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | Protein-histidine kinases are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions. 1 transmembrane helice predicted by TMHMM2.0. | 0.445 |
| AARI_09710 | AARI_09700 | AARI_09710 | AARI_09700 | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | 0.814 |
| AARI_09710 | AARI_09720 | AARI_09710 | AARI_09720 | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.516 |
| AARI_09710 | AARI_09730 | AARI_09710 | AARI_09730 | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0. | 0.516 |
| AARI_09710 | AARI_09740 | AARI_09710 | AARI_09740 | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | Response regulators are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions. | 0.497 |
| AARI_09710 | AARI_09750 | AARI_09710 | AARI_09750 | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | Protein-histidine kinases are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions. 1 transmembrane helice predicted by TMHMM2.0. | 0.445 |
| AARI_09720 | AARI_09700 | AARI_09720 | AARI_09700 | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | 0.516 |
| AARI_09720 | AARI_09710 | AARI_09720 | AARI_09710 | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | 0.516 |
| AARI_09720 | AARI_09730 | AARI_09720 | AARI_09730 | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0. | 0.939 |
| AARI_09720 | AARI_09740 | AARI_09720 | AARI_09740 | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Response regulators are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions. | 0.948 |
| AARI_09720 | AARI_09750 | AARI_09720 | AARI_09750 | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Protein-histidine kinases are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions. 1 transmembrane helice predicted by TMHMM2.0. | 0.932 |
| AARI_09720 | AARI_09760 | AARI_09720 | AARI_09760 | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Conserved hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0. | 0.956 |
| AARI_09720 | AARI_09770 | AARI_09720 | AARI_09770 | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Solute:Sodium Symporter (SSS) family (2.A.21.y.z). Members of the SSS family catalyze solute:Na+ symport. The solutes transported may be sugars, amino acids, organo cations such as choline, nucleosides, inositols, vitamins, urea or anions, depending on the system; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.659 |
| AARI_09730 | AARI_09700 | AARI_09730 | AARI_09700 | Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0. | Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | 0.516 |
| AARI_09730 | AARI_09710 | AARI_09730 | AARI_09710 | Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0. | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | 0.516 |
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