STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctAC4-dicarboxylate transporter; Identified by similarity to protein SP:Q8NMH8 (Corynebacterium glutamicum). Dicarboxylate/Amino Acid:Cation (Na+ or H+) symporter (DAACS) family, C4-dicarboxylate transporter (substrates: fumarate, D- and L-malate, succinate, succinamide, orotate, iticonate, mesaconate) (TC 2.A.23.1.3). (432 aa)    
Predicted Functional Partners:
AARI_11750
Protein-histidine kinases are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions.
 
  
 0.852
AARI_11740
Response regulators are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions.
 
   
 0.825
sdhD
The succinate dehydrogenase complex catalyses the interconversion of fumarate and succinate. It contains several subunits: a flavoprotein (SdhA), an iron-sulfur protein (SdhB), and membrane anchor proteins (SdhC and SdhD). Involved in the TCA cycle.
   
  
 0.542
putA
Proline dehydrogenase (EC 1.5.99.8) catalyses the following reaction: L-proline + acceptor + H(2)O <=> (S)-1-pyrroline-5-carboxylate + reduced acceptor. Pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) catalyses the following reaction: 1-pyrroline-5-carboxylate + NAD(+) + H(2)O <=> L-glutamate + NADH.
   
  
 0.533
gltB
Glutamate synthase (NADPH) subunit alpha; Glutamate synthase participates in the ammonia assimilation process by catalyzing the formation of glutamate from glutamine and 2-oxoglutarate.
     
 0.530
AARI_11770
GDSL-like lipase/esterase; Identified by match to protein family PF00657.
       0.494
AARI_10470
Protein-histidine kinases are key elements in two-component signal transduction systems, which enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions.
 
  
 0.490
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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