STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_12410HNH endonuclease domain-containing protein; Identified by match to SM00507. (486 aa)    
Predicted Functional Partners:
AARI_18100
Identified by match to cd00085: HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins.
  
     0.702
AARI_15050
HNH endonuclease domain-containing protein; Identified by match to PF01844.
  
     0.689
AARI_25920
Identified by match to cd00085: HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins.
  
     0.684
AARI_11500
HNH endonuclease domain-containing protein; Identified by match to PF01844.
  
     0.681
AARI_19300
Conserved hypothetical protein; 5.1 Protein of unknown function similar to other proteins from the same organism.
  
     0.661
AARI_34070
Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0.
  
     0.559
AARI_12420
Putative metal uptake regulation protein; Match to protein family PF01475; Belongs to the Fur family.
       0.513
AARI_28220
Putative DNA-binding protein; Match to PF00376: MerR family regulatory protein.
 
     0.464
AARI_20920
Conserved hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0.
  
     0.442
AARI_26720
Conserved hypothetical membrane protein; 4 transmembrane helices predicted by TMHMM2.0.
  
     0.421
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
Server load: low (24%) [HD]