STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nucSConserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. (231 aa)    
Predicted Functional Partners:
AARI_12810
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
     
 0.828
nagA
Catalyzes the hydrolysis of N-acetylglucosamine-6-phosphate to glucosamine-6-phosphate and acetate.
      0.797
whiB-2
WhiB-family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.721
AARI_12870
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.717
dnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 
 0.713
AARI_12760
Conserved hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0.
     
 0.684
AARI_24620
Phosphoglycerate mutase family protein; Identified by match to protein domain PF00300.
  
     0.683
AARI_11970
Members of the MerR-family include the mercuric resistance operon regulatory protein merR; Bacillus subtilis bltR and bmrR; Bacillus glnR; Streptomyces coelicolor hspR; Bradyrhizobium japonicum nolA; Escherichia coli superoxide response regulator soxR; and Streptomyces lividans transcriptional activator tipA.
  
     0.680
AARI_21310
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.674
AARI_20680
Conserved hypothetical membrane protein; 3 transmembrane helices predicted by TMHMM2.0.
  
     0.663
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.