STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_13000TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). (305 aa)    
Predicted Functional Partners:
AARI_12990
Putative GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships.
  
 0.977
AARI_13010
Putative ABC transporter, inner membrane subunit; TC 3.1.y.z. ABCISSE: ABC transporter, permease (IM).
 
     0.949
atpD
H(+)-transporting two-sector ATPase, beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.576
atpA
H(+)-transporting two-sector ATPase, alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
   0.556
atpG
H(+)-transporting two-sector ATPase, gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.545
atpC
H(+)-transporting two-sector ATPase, epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.521
AARI_13020
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.449
AARI_02020
Putative ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z), DRI-family. Inverted organization, in which the permease component (IM) is C-terminal with respect to the ABC domain (ABC-IM).
 
  
0.448
AARI_03920
Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake).
   
 0.407
AARI_03930
Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake).
   
 0.407
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
Server load: low (14%) [HD]