Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AARI_02020 | AARI_13000 | AARI_02020 | AARI_13000 | Putative ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z), DRI-family. Inverted organization, in which the permease component (IM) is C-terminal with respect to the ABC domain (ABC-IM). | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | 0.448 |
| AARI_03920 | AARI_03930 | AARI_03920 | AARI_03930 | Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake). | Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake). | 0.867 |
| AARI_03920 | AARI_13000 | AARI_03920 | AARI_13000 | Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake). | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | 0.407 |
| AARI_03930 | AARI_03920 | AARI_03930 | AARI_03920 | Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake). | Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake). | 0.867 |
| AARI_03930 | AARI_13000 | AARI_03930 | AARI_13000 | Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake). | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | 0.407 |
| AARI_12990 | AARI_13000 | AARI_12990 | AARI_13000 | Putative GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | 0.977 |
| AARI_12990 | AARI_13010 | AARI_12990 | AARI_13010 | Putative GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | Putative ABC transporter, inner membrane subunit; TC 3.1.y.z. ABCISSE: ABC transporter, permease (IM). | 0.916 |
| AARI_12990 | AARI_13020 | AARI_12990 | AARI_13020 | Putative GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.400 |
| AARI_13000 | AARI_02020 | AARI_13000 | AARI_02020 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | Putative ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z), DRI-family. Inverted organization, in which the permease component (IM) is C-terminal with respect to the ABC domain (ABC-IM). | 0.448 |
| AARI_13000 | AARI_03920 | AARI_13000 | AARI_03920 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake). | 0.407 |
| AARI_13000 | AARI_03930 | AARI_13000 | AARI_03930 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | Iron-siderophore ABC transporter, ATPase and permease components; TCDB: ATP-binding cassette (ABC) superfamily, siderophore-Fe3+ uptake transporter (SIUT) family (TC 3.A. 1.21.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC), DPL-family, SID-subfamily (siderophore uptake). | 0.407 |
| AARI_13000 | AARI_12990 | AARI_13000 | AARI_12990 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | Putative GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | 0.977 |
| AARI_13000 | AARI_13010 | AARI_13000 | AARI_13010 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | Putative ABC transporter, inner membrane subunit; TC 3.1.y.z. ABCISSE: ABC transporter, permease (IM). | 0.949 |
| AARI_13000 | AARI_13020 | AARI_13000 | AARI_13020 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.449 |
| AARI_13000 | atpA | AARI_13000 | AARI_12720 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | H(+)-transporting two-sector ATPase, alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.556 |
| AARI_13000 | atpC | AARI_13000 | AARI_12750 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | H(+)-transporting two-sector ATPase, epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.521 |
| AARI_13000 | atpD | AARI_13000 | AARI_12740 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | H(+)-transporting two-sector ATPase, beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.576 |
| AARI_13000 | atpG | AARI_13000 | AARI_12730 | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | H(+)-transporting two-sector ATPase, gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.545 |
| AARI_13010 | AARI_12990 | AARI_13010 | AARI_12990 | Putative ABC transporter, inner membrane subunit; TC 3.1.y.z. ABCISSE: ABC transporter, permease (IM). | Putative GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | 0.916 |
| AARI_13010 | AARI_13000 | AARI_13010 | AARI_13000 | Putative ABC transporter, inner membrane subunit; TC 3.1.y.z. ABCISSE: ABC transporter, permease (IM). | TCDB: ATP-binding cassette (ABC) superfamily (TC 3. A.1.y.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), NO family (NO family systems represent few ABC proteins with unknown function and which are apparently unrelated to existent families). | 0.949 |
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