Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| AARI_09490 | AARI_13830 | Putative cytochrome P450. | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | 0.562 |
| AARI_13820 | AARI_13830 | Hypothetical secreted protein; Signal peptide predicted by SignalP 3.0 HMM (probability: 1.000) with cleavage site probability 0.464 between position 43 and 44. | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | 0.494 |
| AARI_13830 | AARI_09490 | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | Putative cytochrome P450. | 0.562 |
| AARI_13830 | AARI_13820 | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | Hypothetical secreted protein; Signal peptide predicted by SignalP 3.0 HMM (probability: 1.000) with cleavage site probability 0.464 between position 43 and 44. | 0.494 |
| AARI_13830 | AARI_14900 | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | Match to PF00534: Glycosyl transferases group 1. Proteins containing this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. | 0.402 |
| AARI_13830 | AARI_19180 | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.500 |
| AARI_13830 | AARI_24390 | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | Putative GNAT-family acetyltransferase; Match to PF00583: acetyltransferase (GNAT) family. Match to PF042229: Uncharacterised protein family (UPF0157). | 0.672 |
| AARI_13830 | AARI_29100 | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | DNA binding domain-containing protein; Match to PF00196: Bacterial regulatory proteins, luxR family. | 0.418 |
| AARI_14900 | AARI_13830 | Match to PF00534: Glycosyl transferases group 1. Proteins containing this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | 0.402 |
| AARI_19180 | AARI_13830 | 5.2 Protein of unknown function similar to proteins from other organisms. | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | 0.500 |
| AARI_19180 | AARI_29100 | 5.2 Protein of unknown function similar to proteins from other organisms. | DNA binding domain-containing protein; Match to PF00196: Bacterial regulatory proteins, luxR family. | 0.423 |
| AARI_24390 | AARI_13830 | Putative GNAT-family acetyltransferase; Match to PF00583: acetyltransferase (GNAT) family. Match to PF042229: Uncharacterised protein family (UPF0157). | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | 0.672 |
| AARI_29100 | AARI_13830 | DNA binding domain-containing protein; Match to PF00196: Bacterial regulatory proteins, luxR family. | Putative SAM-dependent methyltransferase; Identified by match to protein domain PF08241. | 0.418 |
| AARI_29100 | AARI_19180 | DNA binding domain-containing protein; Match to PF00196: Bacterial regulatory proteins, luxR family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.423 |