STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_15180Glycine betaine/proline transport system substrate-binding protein; TCDB: ATP-binding cassette (ABC) superfamily, quaternary amine uptake transporter (QAT) family (TC 3.A.1. 12.z). ABCISSE: ABC transporter, binding protein (BP), OTCN-family (osmoprotectants, taurine, cyanate and nitrate). Part of an uptake system of osmoprotrectants such as glycine betaine, carnitine, choline, proline betaine and L-proline. (297 aa)    
Predicted Functional Partners:
AARI_15190
Glycine betaine/proline transport system permease protein; TCDB: ATP-binding cassette (ABC) superfamily, quaternary amine uptake transporter (QAT) family (TC 3.A.1. 12.z). ABCISSE: ABC transporter, permease (IM), OTCN-family (osmoprotectants, taurine, cyanate and nitrate). Part of an uptake system of osmoprotrectants such as glycine betaine, carnitine, choline, proline betaine and L-proline.
 
 0.999
AARI_15200
TCDB: ATP-binding cassette (ABC) superfamily, quaternary amine uptake transporter (QAT) family (TC 3.A.1. 12.z). ABCISSE: ABC transporter, ATP-binding protein (ABC), OTCN-family (osmoprotectants, taurine, cyanate and nitrate). Part of an uptake system of osmoprotrectants such as glycine betaine, carnitine, choline, proline betaine and L-proline.
 0.998
potA
Polyamine ABC transporter, ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
   
 0.457
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.442
AARI_24370
TCDB: ATP-binding cassette (ABC) superfamily, polar amino acid uptake transporter (PAAT) family (TC 3.A.1.3.z). ABCISSE: ABC transporter, permease and binding protein (BP-IM), PAO-family (polar amino acid and opines). The PAO family includes transport systems for amino acids that have polar or charged side chains: lysine, histidine, ornithine, arginine, glutamine, glutamate, cystine and diaminopimelic acid.
     
 0.430
AARI_10860
Osmoprotectant transport system substrate-binding protein; TCDB: ATP-binding cassette (ABC) superfamily, quaternary amine uptake transporter (QAT) family (TC 3.A.1. 12.z). ABCISSE: ABC transporter, binding protein (BP), OTCN-family (osmoprotectants, taurine, cyanate and nitrate). Part of an uptake system of osmoprotrectants such as glycine betaine, carnitine, choline, proline betaine and L-proline.
   
 
 0.428
AARI_28100
Osmoprotectant transport system substrate-binding protein; TCDB: ATP-binding cassette (ABC) superfamily, quaternary amine uptake transporter (QAT) family (TC 3.A.1. 12.z). ABCISSE: ABC transporter, binding protein (BP), OTCN-family (osmoprotectants, taurine, cyanate and nitrate). Part of an uptake system of osmoprotrectants such as glycine betaine, carnitine, choline, proline betaine and L-proline.
   
 
 0.428
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.