STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_15370Hypothetical membrane protein; 5 transmembrane helices predicted by TMHMM2.0. (220 aa)    
Predicted Functional Partners:
AARI_15380
Putative transcriptional regulator.
       0.827
AARI_15390
Putative CsbD-family protein; Identified by match to protein family PF05532. CsbD is a bacterial general stress response protein. Its expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear; Belongs to the UPF0337 (CsbD) family.
       0.467
AARI_15360
SAM-dependent methyltransferase; Identified by match to protein domain PF08241.
       0.418
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.