STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_15420Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. (213 aa)    
Predicted Functional Partners:
AARI_13180
TetR-family transcriptional regulator; Identified by match to protein domains PF02909 and PF00440.
  
     0.683
AARI_27820
TetR-family transcriptional regulator; Identified by match to PF00440: bacterial regulatory proteins, tetR family.
  
     0.631
AARI_15410
Match to PF04101: Glycosyltransferase family 28 N-terminal domain. This family family comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (EC 2.4.1.46); 1,2-diacylglycerol 3-beta-glucosyltransferase (EC 2.4.1.157); beta-N-acetylglucosamine transferase (EC 2.4.1).
       0.547
argE
Acetylornithine deacetylase; Removes the acetyl group from N-acetyl-ornithine. Involved in arginine biosynthesis.
       0.506
AARI_16800
FAD-dependent oxidoreductase; Identified by match to protein family PF01266. This family includes various FAD dependent oxidoreductases: glycerol-3-phosphate dehydrogenase (EC 1.1.5.3), sarcosine oxidase beta subunit (EC 1.5.3.1), D-alanine oxidase (EC 1. 4.99.1) and D-aspartate oxidase (EC 1.4.3.1).
 
 
   0.434
AARI_15400
Putative methyltransferase; Match to protein domain PF05175. This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases.
       0.412
AARI_15440
Major facilitator superfamily (MFS), metabolite:H+ symporter (MHS) family (TC 2.A.1.6.z).
       0.412
AARI_01670
RibD domain-containing protein; Match to protein domain PF01872. This domain is found in the C-terminus of the bifunctional deaminase-reductase in combination with PF00383 as well as in isolation in some archaebacterial proteins.
  
     0.411
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.