STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_16500Identified by match to protein family PF01145. The band 7 protein is an integral membrane protein which is thought to regulate cation conductance. A variety of proteins belong to this family. (312 aa)    
Predicted Functional Partners:
AARI_16510
Conserved hypothetical membrane protein; 3 transmembrane helices predicted by TMHMM2.0.
 
  
 0.943
ftsH
Putative cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.905
AARI_00130
Identified by match to protein family PF01694. This group of proteins contain serine peptidases belonging to the MEROPS peptidase family S54 (Rhomboid, clan S-). They are integral membrane proteins related to the Drosophila melanogaster (Fruit fly) rhomboid protein. 7 transmembrane helices predicted by TMHMM2.0.
   
 0.736
AARI_10740
Putative M16 family peptidase; Identified by match to PF05193 and PF00675. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They also include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity.
  
 0.611
arc
COG1222: RPT1, ATP-dependent 26S proteasome regulatory subunit. Proteasomes are large protein complexes, which main function is to degrade unneeded or damaged proteins.
   
 
 0.587
rbpA
Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
       0.543
AARI_10020
Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family.
  
    0.516
AARI_07640
Hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0.
   
    0.512
rrmA
Putative rRNA (guanine-N(1)-)-methyltransferase; rRNA methyltransferase catalyzes the following reaction: S-adenosyl-L-methionine + rRNA => S-adenosyl-L-homocysteine + rRNA containing N(1)-methylguanine. It is required for translation and cell growth.
 
     0.512
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.502
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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