Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AARI_14740 | AARI_18570 | AARI_14740 | AARI_18570 | Putative CsbD-family protein; Identified by match to protein family PF05532. CsbD is a bacterial general stress response protein. Its expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.481 |
| AARI_15390 | AARI_18570 | AARI_15390 | AARI_18570 | Putative CsbD-family protein; Identified by match to protein family PF05532. CsbD is a bacterial general stress response protein. Its expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear; Belongs to the UPF0337 (CsbD) family. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.481 |
| AARI_18120 | AARI_18570 | AARI_18120 | AARI_18570 | Hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.518 |
| AARI_18570 | AARI_14740 | AARI_18570 | AARI_14740 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Putative CsbD-family protein; Identified by match to protein family PF05532. CsbD is a bacterial general stress response protein. Its expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear. | 0.481 |
| AARI_18570 | AARI_15390 | AARI_18570 | AARI_15390 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Putative CsbD-family protein; Identified by match to protein family PF05532. CsbD is a bacterial general stress response protein. Its expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear; Belongs to the UPF0337 (CsbD) family. | 0.481 |
| AARI_18570 | AARI_18120 | AARI_18570 | AARI_18120 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0. | 0.518 |
| AARI_18570 | AARI_18580 | AARI_18570 | AARI_18580 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Identified by match to protein family PF01152: bacterial-like globin. Globins are heme-containing proteins involved in binding and/or transporting oxygen. | 0.974 |
| AARI_18570 | AARI_27470 | AARI_18570 | AARI_27470 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. | 0.580 |
| AARI_18570 | AARI_35340 | AARI_18570 | AARI_35340 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Transposase of ISAar28, IS481 family. | 0.501 |
| AARI_18570 | dkgA | AARI_18570 | AARI_05170 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Putative 2,5-didehydrogluconate reductase; Catalyzes the reduction of 2,5-diketogluconic acid to 2-keto-L-gulonic acid, a key intermediate in the production of ascorbic acid. Can also reduce ethyl 2-methylacetoacetate stereoselectively to ethyl (2R)-methyl-(3S)-hydroxybutanoate and can also accept some other beta-keto esters. Identified by similarity to protein SP:Q46857 (Escherichia coli). | 0.413 |
| AARI_18570 | dkgA-2 | AARI_18570 | AARI_08870 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Putative 2,5-didehydrogluconate reductase; Catalyzes the reduction of 2,5-diketogluconic acid to 2-keto-L-gulonic acid, a key intermediate in the production of ascorbic acid. Can also reduce ethyl 2-methylacetoacetate stereoselectively to ethyl (2R)-methyl-(3S)-hydroxybutanoate and can also accept some other beta-keto esters. Identified by similarity to protein SP:Q46857 (Escherichia coli). | 0.413 |
| AARI_18570 | dkgA-3 | AARI_18570 | AARI_17510 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Putative 2,5-didehydrogluconate reductase; Catalyzes the reduction of 2,5-diketogluconic acid to 2-keto-L-gulonic acid, a key intermediate in the production of ascorbic acid. Can also reduce ethyl 2-methylacetoacetate stereoselectively to ethyl (2R)-methyl-(3S)-hydroxybutanoate and can also accept some other beta-keto esters. Identified by similarity to protein SP:Q46857 (Escherichia coli). | 0.413 |
| AARI_18570 | otsA | AARI_18570 | AARI_05410 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Synthesis of trehalose 6-phosphate from UDP-glucose and glucose-6-phosphate. | 0.443 |
| AARI_18580 | AARI_18570 | AARI_18580 | AARI_18570 | Identified by match to protein family PF01152: bacterial-like globin. Globins are heme-containing proteins involved in binding and/or transporting oxygen. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.974 |
| AARI_18580 | AARI_35340 | AARI_18580 | AARI_35340 | Identified by match to protein family PF01152: bacterial-like globin. Globins are heme-containing proteins involved in binding and/or transporting oxygen. | Transposase of ISAar28, IS481 family. | 0.486 |
| AARI_27470 | AARI_18570 | AARI_27470 | AARI_18570 | DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.580 |
| AARI_35340 | AARI_18570 | AARI_35340 | AARI_18570 | Transposase of ISAar28, IS481 family. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.501 |
| AARI_35340 | AARI_18580 | AARI_35340 | AARI_18580 | Transposase of ISAar28, IS481 family. | Identified by match to protein family PF01152: bacterial-like globin. Globins are heme-containing proteins involved in binding and/or transporting oxygen. | 0.486 |
| dkgA | AARI_18570 | AARI_05170 | AARI_18570 | Putative 2,5-didehydrogluconate reductase; Catalyzes the reduction of 2,5-diketogluconic acid to 2-keto-L-gulonic acid, a key intermediate in the production of ascorbic acid. Can also reduce ethyl 2-methylacetoacetate stereoselectively to ethyl (2R)-methyl-(3S)-hydroxybutanoate and can also accept some other beta-keto esters. Identified by similarity to protein SP:Q46857 (Escherichia coli). | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.413 |
| dkgA-2 | AARI_18570 | AARI_08870 | AARI_18570 | Putative 2,5-didehydrogluconate reductase; Catalyzes the reduction of 2,5-diketogluconic acid to 2-keto-L-gulonic acid, a key intermediate in the production of ascorbic acid. Can also reduce ethyl 2-methylacetoacetate stereoselectively to ethyl (2R)-methyl-(3S)-hydroxybutanoate and can also accept some other beta-keto esters. Identified by similarity to protein SP:Q46857 (Escherichia coli). | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.413 |
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