Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AARI_09490 | AARI_18350 | AARI_09490 | AARI_18350 | Putative cytochrome P450. | Sulfite reductase catalyzes the reduction of sulfite to sulphide. Involved in the sulfate assimilation pathway. | 0.651 |
| AARI_09490 | AARI_18610 | AARI_09490 | AARI_18610 | Putative cytochrome P450. | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | 0.969 |
| AARI_09490 | gltD | AARI_09490 | AARI_19420 | Putative cytochrome P450. | Glutamate synthase (NADPH) subunit beta; Glutamate synthase participates in the ammonia assimilation process by catalyzing the formation of glutamate from glutamine and 2-oxoglutarate. | 0.643 |
| AARI_13480 | AARI_18610 | AARI_13480 | AARI_18610 | Putative cysteine desulfurase; Identified by match to protein family PIRSF005572: cysteine desulfurase, NifS type. Cysteine desulfurase catalyses the following reaction: L-cysteine + [enzyme]-cysteine <=> L-alanine + [enzyme]-S-sulfanylcysteine. It is involved in the biosynthesis of iron-sulfur clusters, thio-nucleosides in tRNA, thiamine, biotin, lipoate and pyranopterin (molybdopterin) and functions by mobilizing sulfur. | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | 0.863 |
| AARI_13480 | AARI_21150 | AARI_13480 | AARI_21150 | Putative cysteine desulfurase; Identified by match to protein family PIRSF005572: cysteine desulfurase, NifS type. Cysteine desulfurase catalyses the following reaction: L-cysteine + [enzyme]-cysteine <=> L-alanine + [enzyme]-S-sulfanylcysteine. It is involved in the biosynthesis of iron-sulfur clusters, thio-nucleosides in tRNA, thiamine, biotin, lipoate and pyranopterin (molybdopterin) and functions by mobilizing sulfur. | Putative cysteine desulfurase; Identified by match to protein family PIRSF005572: cysteine desulfurase, NifS type. Cysteine desulfurase catalyses the following reaction: L-cysteine + [enzyme]-cysteine <=> L-alanine + [enzyme]-S-sulfanylcysteine. It is involved in the biosynthesis of iron-sulfur clusters, thio-nucleosides in tRNA, thiamine, biotin, lipoate and pyranopterin (molybdopterin) and functions by mobilizing sulfur. | 0.920 |
| AARI_13480 | sufU | AARI_13480 | AARI_08140 | Putative cysteine desulfurase; Identified by match to protein family PIRSF005572: cysteine desulfurase, NifS type. Cysteine desulfurase catalyses the following reaction: L-cysteine + [enzyme]-cysteine <=> L-alanine + [enzyme]-S-sulfanylcysteine. It is involved in the biosynthesis of iron-sulfur clusters, thio-nucleosides in tRNA, thiamine, biotin, lipoate and pyranopterin (molybdopterin) and functions by mobilizing sulfur. | SUF system FeS assembly protein; Identified by match to protein family TIGR01994. The SUF system is an iron-sulfur cluster assembly system that operates under iron starvation and oxidative stress. SufU may act as a scaffold on which the Fe-S cluster is built and from which it is transferred. | 0.976 |
| AARI_18350 | AARI_09490 | AARI_18350 | AARI_09490 | Sulfite reductase catalyzes the reduction of sulfite to sulphide. Involved in the sulfate assimilation pathway. | Putative cytochrome P450. | 0.651 |
| AARI_18350 | AARI_18610 | AARI_18350 | AARI_18610 | Sulfite reductase catalyzes the reduction of sulfite to sulphide. Involved in the sulfate assimilation pathway. | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | 0.887 |
| AARI_18350 | pyrDII | AARI_18350 | AARI_31530 | Sulfite reductase catalyzes the reduction of sulfite to sulphide. Involved in the sulfate assimilation pathway. | Putative dihydroorotate oxidase electron transfer subunit; Dihydroorotate oxidase catalyzes the fourth step in the de novo biosynthesis of pyrimidine, the conversion of dihydroorotate into orotate. In some organisms such as Bacillus subtilis, dihydroorotate oxidase is composed of two subunits: PyrDI and PyrDII. | 0.739 |
| AARI_18350 | sir | AARI_18350 | AARI_18430 | Sulfite reductase catalyzes the reduction of sulfite to sulphide. Involved in the sulfate assimilation pathway. | Sulfite reductase (ferredoxin); Catalyzes the reduction of sulfite to sulphide. Involved in the sulfate assimilation pathway; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.929 |
| AARI_18610 | AARI_09490 | AARI_18610 | AARI_09490 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | Putative cytochrome P450. | 0.969 |
| AARI_18610 | AARI_13480 | AARI_18610 | AARI_13480 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | Putative cysteine desulfurase; Identified by match to protein family PIRSF005572: cysteine desulfurase, NifS type. Cysteine desulfurase catalyses the following reaction: L-cysteine + [enzyme]-cysteine <=> L-alanine + [enzyme]-S-sulfanylcysteine. It is involved in the biosynthesis of iron-sulfur clusters, thio-nucleosides in tRNA, thiamine, biotin, lipoate and pyranopterin (molybdopterin) and functions by mobilizing sulfur. | 0.863 |
| AARI_18610 | AARI_18350 | AARI_18610 | AARI_18350 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | Sulfite reductase catalyzes the reduction of sulfite to sulphide. Involved in the sulfate assimilation pathway. | 0.887 |
| AARI_18610 | AARI_21150 | AARI_18610 | AARI_21150 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | Putative cysteine desulfurase; Identified by match to protein family PIRSF005572: cysteine desulfurase, NifS type. Cysteine desulfurase catalyses the following reaction: L-cysteine + [enzyme]-cysteine <=> L-alanine + [enzyme]-S-sulfanylcysteine. It is involved in the biosynthesis of iron-sulfur clusters, thio-nucleosides in tRNA, thiamine, biotin, lipoate and pyranopterin (molybdopterin) and functions by mobilizing sulfur. | 0.863 |
| AARI_18610 | gltD | AARI_18610 | AARI_19420 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | Glutamate synthase (NADPH) subunit beta; Glutamate synthase participates in the ammonia assimilation process by catalyzing the formation of glutamate from glutamine and 2-oxoglutarate. | 0.887 |
| AARI_18610 | paaN | AARI_18610 | AARI_24450 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | Phenylacetic acid degradation protein PaaN; Involved in aromatic ring opening step of the phenylacetic acid catabolic pathway. | 0.767 |
| AARI_18610 | pyrDII | AARI_18610 | AARI_31530 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | Putative dihydroorotate oxidase electron transfer subunit; Dihydroorotate oxidase catalyzes the fourth step in the de novo biosynthesis of pyrimidine, the conversion of dihydroorotate into orotate. In some organisms such as Bacillus subtilis, dihydroorotate oxidase is composed of two subunits: PyrDI and PyrDII. | 0.880 |
| AARI_18610 | sir | AARI_18610 | AARI_18430 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | Sulfite reductase (ferredoxin); Catalyzes the reduction of sulfite to sulphide. Involved in the sulfate assimilation pathway; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.893 |
| AARI_18610 | soxA | AARI_18610 | AARI_27180 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine and forms equimolar amounts of formaldehyde, glycine and hydrogen peroxide. | 0.898 |
| AARI_18610 | sufU | AARI_18610 | AARI_08140 | MOSC domain-containing protein; Match to PF03473. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters. | SUF system FeS assembly protein; Identified by match to protein family TIGR01994. The SUF system is an iron-sulfur cluster assembly system that operates under iron starvation and oxidative stress. SufU may act as a scaffold on which the Fe-S cluster is built and from which it is transferred. | 0.925 |
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