STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_19060UPF0052 family protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (341 aa)    
Predicted Functional Partners:
AARI_19070
Uncharacterised P-loop ATPase protein UPF0042; Displays ATPase and GTPase activities.
  
  
 0.952
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
 
  
 0.935
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.831
AARI_19090
1-acylglycerol-3-phosphate O-acyltransferase catalyzes the following reaction: Acyl-CoA + 1-acyl-sn-glycerol 3-phosphate <=> CoA + 1,2-diacyl-sn-glycerol 3-phosphate. It is involved in phospholipid biosynthesis.
       0.804
AARI_19100
Identified by match to PF00702. This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases.
       0.796
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
   
 0.599
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.570
uvrA-2
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.568
AARI_00370
Match to PF00481: protein phosphatase 2C.
  
  
 0.555
gap-2
Glyceraldehyde-3-phosphate dehydrogenase; Catalyses the reversible oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate.
     
 0.553
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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