STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_19150Putative ATP-dependent helicase; Possible DNA or RNA helicase. (843 aa)    
Predicted Functional Partners:
AARI_19160
NUDIX hydrolase; Identified by match to PF00293. Members of the Nudix hydrolase superfamily catalyze the hydrolysis of nucleoside diphosphates linked to other moieties. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain ce [...]
       0.773
secG
Possible protein-export membrane protein SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.583
tam
Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
       0.574
AARI_00380
FHA domain-containing protein; Match to PF00498. The forkhead-associated (FHA) domain is a phosphopeptide recognition domain found in many regulatory proteins.
  
     0.566
AARI_19170
6 Protein of unknown function, without similarity to other proteins.
       0.566
AARI_11940
FHA domain-containing protein; Match to PF00498. The forkhead-associated (FHA) domain is a phosphopeptide recognition domain found in many regulatory proteins.
  
     0.551
hrpA
ATP-dependent helicase HrpA; Identified by similarity to protein SP:P43329 (Escherichia coli).
 
     0.532
AARI_17110
Putative DNA-binding protein; Match to SM00278 (Helix-hairpin-helix DNA-binding motif, class 1).
  
     0.489
AARI_00390
FHA domain-containing protein; Match to PF00498. The forkhead-associated (FHA) domain is a phosphopeptide recognition domain found in many regulatory proteins.
  
     0.442
rpsA
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
  
     0.409
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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