Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| AARI_04020 | AARI_19200 | DNA (cytosine-5-)-methyltransferase-like protein; C-5 cytosine-specific DNA methylases are enzymes that specifically methylate the C-5 carbon of cytosines in DNA. They are found as a component of type II restriction-modification systems in prokaryotes and some bacteriophages; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | 0.499 |
| AARI_05920 | AARI_19200 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | 0.570 |
| AARI_13180 | AARI_19200 | TetR-family transcriptional regulator; Identified by match to protein domains PF02909 and PF00440. | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | 0.554 |
| AARI_19180 | AARI_19200 | 5.2 Protein of unknown function similar to proteins from other organisms. | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | 0.417 |
| AARI_19180 | AARI_35360 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transposase of ISAar29, IS110 family. | 0.648 |
| AARI_19190 | AARI_19200 | 6 Protein of unknown function, without similarity to other proteins. | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | 0.615 |
| AARI_19190 | AARI_19210 | 6 Protein of unknown function, without similarity to other proteins. | Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family. | 0.452 |
| AARI_19190 | AARI_19220 | 6 Protein of unknown function, without similarity to other proteins. | Putative prolyl aminopeptidase; Releases N-terminal proline from a peptide. | 0.452 |
| AARI_19190 | AARI_35360 | 6 Protein of unknown function, without similarity to other proteins. | Transposase of ISAar29, IS110 family. | 0.567 |
| AARI_19200 | AARI_04020 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | DNA (cytosine-5-)-methyltransferase-like protein; C-5 cytosine-specific DNA methylases are enzymes that specifically methylate the C-5 carbon of cytosines in DNA. They are found as a component of type II restriction-modification systems in prokaryotes and some bacteriophages; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.499 |
| AARI_19200 | AARI_05920 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.570 |
| AARI_19200 | AARI_13180 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | TetR-family transcriptional regulator; Identified by match to protein domains PF02909 and PF00440. | 0.554 |
| AARI_19200 | AARI_19180 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.417 |
| AARI_19200 | AARI_19190 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | 6 Protein of unknown function, without similarity to other proteins. | 0.615 |
| AARI_19200 | AARI_19210 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family. | 0.623 |
| AARI_19200 | AARI_19220 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | Putative prolyl aminopeptidase; Releases N-terminal proline from a peptide. | 0.560 |
| AARI_19200 | AARI_26050 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | 0.448 |
| AARI_19200 | AARI_26480 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | 0.654 |
| AARI_19200 | AARI_35360 | Identified by match to PF04307: predicted membrane-bound metal-dependent hydrolase (DUF457). | Transposase of ISAar29, IS110 family. | 0.414 |
| AARI_19210 | AARI_19190 | Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family. | 6 Protein of unknown function, without similarity to other proteins. | 0.452 |
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