Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| AARI_04800 | AARI_19770 | Identified by match to protein family PF07152. This family consists of several hypothetical bacterial proteins of around 180 residues in length, which are often known as YaeQ. YaeQ is homologous to RfaH, a specialised transcription elongation protein. YaeQ is known to compensate for loss of RfaH function in Escherichia coli and Salmonella typhimurium. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.441 |
| AARI_19740 | AARI_19750 | Thiosulfate sulfurtransferase-like protein. | SufE-like protein; Identified by match to PF02657. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export. | 0.953 |
| AARI_19740 | AARI_19760 | Thiosulfate sulfurtransferase-like protein. | YbaK domain-containing protein; Match to PF04073: YbaK / prolyl-tRNA synthetases associated domain. This domain of unknown function is found in numerous prokaryote organisms. The structure of YbaK shows a novel fold. This domain also occurs in a number of prolyl-tRNA synthetases (proRS) from prokaryotes. Thus, the domain is thought to be involved in oligo-nucleotide binding, with possible roles in recognition/discrimination or editing of prolyl-tRNA. | 0.623 |
| AARI_19740 | AARI_19770 | Thiosulfate sulfurtransferase-like protein. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.401 |
| AARI_19750 | AARI_19740 | SufE-like protein; Identified by match to PF02657. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export. | Thiosulfate sulfurtransferase-like protein. | 0.953 |
| AARI_19750 | AARI_19760 | SufE-like protein; Identified by match to PF02657. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export. | YbaK domain-containing protein; Match to PF04073: YbaK / prolyl-tRNA synthetases associated domain. This domain of unknown function is found in numerous prokaryote organisms. The structure of YbaK shows a novel fold. This domain also occurs in a number of prolyl-tRNA synthetases (proRS) from prokaryotes. Thus, the domain is thought to be involved in oligo-nucleotide binding, with possible roles in recognition/discrimination or editing of prolyl-tRNA. | 0.647 |
| AARI_19750 | AARI_19770 | SufE-like protein; Identified by match to PF02657. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.422 |
| AARI_19760 | AARI_19740 | YbaK domain-containing protein; Match to PF04073: YbaK / prolyl-tRNA synthetases associated domain. This domain of unknown function is found in numerous prokaryote organisms. The structure of YbaK shows a novel fold. This domain also occurs in a number of prolyl-tRNA synthetases (proRS) from prokaryotes. Thus, the domain is thought to be involved in oligo-nucleotide binding, with possible roles in recognition/discrimination or editing of prolyl-tRNA. | Thiosulfate sulfurtransferase-like protein. | 0.623 |
| AARI_19760 | AARI_19750 | YbaK domain-containing protein; Match to PF04073: YbaK / prolyl-tRNA synthetases associated domain. This domain of unknown function is found in numerous prokaryote organisms. The structure of YbaK shows a novel fold. This domain also occurs in a number of prolyl-tRNA synthetases (proRS) from prokaryotes. Thus, the domain is thought to be involved in oligo-nucleotide binding, with possible roles in recognition/discrimination or editing of prolyl-tRNA. | SufE-like protein; Identified by match to PF02657. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export. | 0.647 |
| AARI_19760 | AARI_19770 | YbaK domain-containing protein; Match to PF04073: YbaK / prolyl-tRNA synthetases associated domain. This domain of unknown function is found in numerous prokaryote organisms. The structure of YbaK shows a novel fold. This domain also occurs in a number of prolyl-tRNA synthetases (proRS) from prokaryotes. Thus, the domain is thought to be involved in oligo-nucleotide binding, with possible roles in recognition/discrimination or editing of prolyl-tRNA. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.497 |
| AARI_19770 | AARI_04800 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | Identified by match to protein family PF07152. This family consists of several hypothetical bacterial proteins of around 180 residues in length, which are often known as YaeQ. YaeQ is homologous to RfaH, a specialised transcription elongation protein. YaeQ is known to compensate for loss of RfaH function in Escherichia coli and Salmonella typhimurium. | 0.441 |
| AARI_19770 | AARI_19740 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | Thiosulfate sulfurtransferase-like protein. | 0.401 |
| AARI_19770 | AARI_19750 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | SufE-like protein; Identified by match to PF02657. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export. | 0.422 |
| AARI_19770 | AARI_19760 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | YbaK domain-containing protein; Match to PF04073: YbaK / prolyl-tRNA synthetases associated domain. This domain of unknown function is found in numerous prokaryote organisms. The structure of YbaK shows a novel fold. This domain also occurs in a number of prolyl-tRNA synthetases (proRS) from prokaryotes. Thus, the domain is thought to be involved in oligo-nucleotide binding, with possible roles in recognition/discrimination or editing of prolyl-tRNA. | 0.497 |