STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_21520Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. (207 aa)    
Predicted Functional Partners:
AARI_21530
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.685
AARI_21030
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
 
   0.578
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.510
AARI_16370
Putative proteasome component; Identified by match to protein family PF03136: DUF245, putative proteasome component. Proteasomes are large protein complexes, which main function is to degrade unneeded or damaged proteins.
  
     0.410
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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