Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AARI_16370 | AARI_21520 | AARI_16370 | AARI_21520 | Putative proteasome component; Identified by match to protein family PF03136: DUF245, putative proteasome component. Proteasomes are large protein complexes, which main function is to degrade unneeded or damaged proteins. | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | 0.410 |
AARI_21030 | AARI_21520 | AARI_21030 | AARI_21520 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | 0.578 |
AARI_21520 | AARI_16370 | AARI_21520 | AARI_16370 | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | Putative proteasome component; Identified by match to protein family PF03136: DUF245, putative proteasome component. Proteasomes are large protein complexes, which main function is to degrade unneeded or damaged proteins. | 0.410 |
AARI_21520 | AARI_21030 | AARI_21520 | AARI_21030 | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.578 |
AARI_21520 | AARI_21530 | AARI_21520 | AARI_21530 | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.685 |
AARI_21520 | hemA | AARI_21520 | AARI_21510 | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.510 |
AARI_21530 | AARI_21520 | AARI_21530 | AARI_21520 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | 0.685 |
hemA | AARI_21520 | AARI_21510 | AARI_21520 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Putative transcriptional regulator; Match to PF00440: bacterial regulatory proteins, tetR family. | 0.510 |