STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_21800Identified by match to PF01022. ArsR-family transcriptional regulators include several proteins that appear to dissociate from DNA in the presence of metal ions. (169 aa)    
Predicted Functional Partners:
AARI_03530
Identified by match to PF00082. Subtilases are a family of serine proteases. The vast majority of the family are endopeptidases. Signal peptide predicted by SignalP 3.0 HMM (probability: 1.000) with cleavage site probability 0.964 between position 32 and 33.
  
     0.594
AARI_09880
Dipeptide/oligopeptide ABC transporter, inner membrane subunit; TCDB: ATP-binding cassette (ABC) superfamily, peptide/opine/nickel uptake transporter (PepT) family (TC 3.A.1.5.z). ABCISSE: ABC transporter, permease (IM), OPN-family (oligopeptides and nickel), oligopeptides import.
  
     0.568
AARI_21790
6 Protein of unknown function, without similarity to other proteins.
       0.498
AARI_09580
Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily).
 
     0.463
AARI_28220
Putative DNA-binding protein; Match to PF00376: MerR family regulatory protein.
  
     0.439
AARI_24120
Putative transcriptional regulator; Match to PF07905: purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.
  
    0.404
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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