Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| AARI_10240 | AARI_21900 | Conserved hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.426 |
| AARI_10420 | AARI_21900 | Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.515 |
| AARI_21890 | AARI_21900 | Conserved hypothetical membrane protein; 9 transmembrane helices predicted by TMHMM2.0. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.430 |
| AARI_21900 | AARI_10240 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Conserved hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0. | 0.426 |
| AARI_21900 | AARI_10420 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0. | 0.515 |
| AARI_21900 | AARI_21890 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Conserved hypothetical membrane protein; 9 transmembrane helices predicted by TMHMM2.0. | 0.430 |
| AARI_21900 | AARI_21910 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family. | 0.675 |
| AARI_21900 | AARI_21920 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Putative hydrolase; Match to PF00561: alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | 0.511 |
| AARI_21900 | AARI_21930 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | YhhN-like protein; 6 transmembrane helices predicted by TMHMM2.0. Match to PF07947. The members of this family are similar to the hypothetical protein yhhN expressed by E. coli. Many of the members of this family are annotated as being possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. | 0.511 |
| AARI_21900 | AARI_21940 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Match to protein family PF00903: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. | 0.508 |
| AARI_21900 | AARI_22060 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Conserved hypothetical protein; Match to protein family PF00903: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. | 0.521 |
| AARI_21900 | AARI_26090 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.425 |
| AARI_21900 | AARI_27670 | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.422 |
| AARI_21910 | AARI_21900 | Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.675 |
| AARI_21910 | AARI_21920 | Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family. | Putative hydrolase; Match to PF00561: alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | 0.580 |
| AARI_21910 | AARI_21930 | Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family. | YhhN-like protein; 6 transmembrane helices predicted by TMHMM2.0. Match to PF07947. The members of this family are similar to the hypothetical protein yhhN expressed by E. coli. Many of the members of this family are annotated as being possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. | 0.580 |
| AARI_21910 | AARI_21940 | Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family. | Match to protein family PF00903: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. | 0.491 |
| AARI_21920 | AARI_21900 | Putative hydrolase; Match to PF00561: alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | Identified by match to protein family PF02566: OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress-induced protein found in Escherichia coli. This family also contains an organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation. | 0.511 |
| AARI_21920 | AARI_21910 | Putative hydrolase; Match to PF00561: alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family. | 0.580 |
| AARI_21920 | AARI_21930 | Putative hydrolase; Match to PF00561: alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | YhhN-like protein; 6 transmembrane helices predicted by TMHMM2.0. Match to PF07947. The members of this family are similar to the hypothetical protein yhhN expressed by E. coli. Many of the members of this family are annotated as being possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. | 0.773 |
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