STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_26160Match to protein family PF00724: NADH:flavin oxidoreductase / NADH oxidase family. (369 aa)    
Predicted Functional Partners:
fixA
Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, (housekeeping) ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II). They consist of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain [...]
  
 
 0.647
fixA-2
Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, (housekeeping) ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II). They consist of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain [...]
  
 
 0.647
narH
The respiratory nitrate reductase enzyme complex allows the bacteria to use nitrate as an electron acceptor during anaerobic growth.
    
   0.602
AARI_26170
Divalent cation transporter; Acts as a magnesium transporter.
       0.598
AARI_05290
CarD is a Myxococcus xanthus protein required for the activation of light- and starvation-inducible genes.
   
    0.579
fixB
Identified by match to PIRSF000089. Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, (housekeeping) ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II). They consist of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha [...]
   
 
 0.514
fixB-2
Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, (housekeeping) ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II). They consist of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain [...]
   
 
 0.514
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.507
rpsA
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.503
AARI_18350
Sulfite reductase catalyzes the reduction of sulfite to sulphide. Involved in the sulfate assimilation pathway.
      0.465
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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