Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AARI_26640 | AARI_26650 | Identified by match to protein family PF00326. Prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolutionidentified by match to protein family PF00326. Prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved [...] | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.553 |
AARI_26640 | AARI_26660 | Identified by match to protein family PF00326. Prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolutionidentified by match to protein family PF00326. Prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved [...] | Conserved hypothetical membrane protein; 4 transmembrane helices predicted by TMHMM2.0. | 0.434 |
AARI_26650 | AARI_26640 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | Identified by match to protein family PF00326. Prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolutionidentified by match to protein family PF00326. Prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved [...] | 0.553 |
AARI_26650 | AARI_26660 | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | Conserved hypothetical membrane protein; 4 transmembrane helices predicted by TMHMM2.0. | 0.601 |
AARI_26660 | AARI_26640 | Conserved hypothetical membrane protein; 4 transmembrane helices predicted by TMHMM2.0. | Identified by match to protein family PF00326. Prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolutionidentified by match to protein family PF00326. Prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved [...] | 0.434 |
AARI_26660 | AARI_26650 | Conserved hypothetical membrane protein; 4 transmembrane helices predicted by TMHMM2.0. | Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms. | 0.601 |