STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_26720Conserved hypothetical membrane protein; 4 transmembrane helices predicted by TMHMM2.0. (160 aa)    
Predicted Functional Partners:
AARI_26730
MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily).
       0.714
AARI_01070
Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily).
  
     0.647
AARI_33760
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.477
AARI_20180
Transcriptional repressor; Identified by match to protein family PF03965: penicillinase repressor.
  
     0.443
AARI_20190
Putative M56-family peptidase; Match to protein family PF05569. production of beta-Lactamase and penicillin-binding protein 2a (which mediate staphylococcal resistance to beta-lactam antibiotics) is regulated by a signal-transducing integral membrane protein and a transcriptional repressor. The signal transducer is a fusion protein with penicillin-binding and zinc metalloprotease domains. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription.
  
     0.432
AARI_26740
AsnC/Lrp-family transcriptional regulator; Identified by match to protein family PF01037.
       0.427
AARI_12410
HNH endonuclease domain-containing protein; Identified by match to SM00507.
  
     0.421
AARI_15790
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.405
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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