STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_27300Match to PF04434: SWIM zinc finger. SWIM is thought to be a versatile domain that can interact with DNA or proteins in different contexts. (274 aa)    
Predicted Functional Partners:
AARI_27310
Putative ATP-dependent helicase; Possible DNA or RNA helicase.
    0.995
AARI_27970
Putative ATP-dependent helicase; Possible DNA or RNA helicase.
    0.919
AARI_05740
Putative ATP-dependent helicase; Possible DNA or RNA helicase.
    0.915
AARI_34780
Transposase of ISAar31, IS630 family.
  
     0.524
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.