STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_27560Ribose ABC transporter, inner membrane subunit; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (127 aa)    
Predicted Functional Partners:
rbsK
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.974
AARI_33640
Multiple sugar ABC transporter, ATP-binding subunit; TCDB: ATP-binding cassette (ABC) superfamily, carbohydrate uptake transporter-2 (CUT2) family (TC 3.A.1. 2.z). ABCISSE: ABCISSE: ABC transporter, fused ATP- binding protein (ABC2), MOS-family (monosaccharides: pentoses and hexoses). Possibly involved in the uptake of multiple sugars such as arabinose, xylose, galactose, glucose, fucose.
 
  
 0.958
AARI_00500
Fructokinase catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate.
  
  
 0.583
AARI_22960
Fructokinase catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate.
  
  
 0.583
AARI_27380
Fructokinase catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate.
  
  
 0.583
AARI_27550
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.483
AARI_32980
Conserved hypothetical protein; Match to protein domain PF05651: putative sugar diacid recognition.
  
     0.469
AARI_27600
LacI-family transcriptional regulator; Match to protein domain PF00356. Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. One such family groups together a range of proteins, including ascG, ccpA, cytR, ebgR, fruR, galR, galS, lacI, malI, opnR, purF, rafR, rbtR and scrR. Within this family, the HTH motif is situated towards the N-terminus.
 
  
 0.437
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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