STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_27880Conserved hypothetical membrane protein; 3 transmembrane helices predicted by TMHMM2.0. (189 aa)    
Predicted Functional Partners:
AARI_27870
AsnC/Lrp-family transcriptional regulator; Identified by match to protein family PF01037.
       0.773
AARI_27890
MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily).
       0.773
AARI_27900
Putative 3-phenylpropionate dioxygenase ferredoxin reductase subunit; 3-phenylpropionate dioxygenase converts 3-phenylpropionic acid (PP) into cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol). Involved in the catabolism of 3-phenylpropionic acid.
       0.773
hcaC
Putative 3-phenylpropionate dioxygenase ferredoxin subunit; Identified by similarity to SP:P0ABW0. Part of multicomponent 3-phenylpropionate dioxygenase, that converts 3-phenylpropionic acid (PP) into cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol). Involved in the catabolism of 3-phenylpropionic acid.
       0.773
AARI_27920
ATPase domain-containing protein; Match to PF01869: BadF/BadG/BcrA/BcrD ATPase family. This family includes the BadF and BadG proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase.
  
    0.543
AARI_09730
Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0.
  
     0.466
AARI_20290
Conserved hypothetical membrane protein; 4 transmembranes helices predicted by TMHMM2.0.
  
     0.464
AARI_27860
Hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0.
       0.445
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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