STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_28060MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). (392 aa)    
Predicted Functional Partners:
AARI_32690
Identified by match to PF00753: metallo-beta-lactamase superfamily. Apart from the beta-lactamases, a number of other proteins contain this domain. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake.
  
     0.580
AARI_31670
ABC transporter, inner membrane subunit; TC 3.A.1.y.z. ABCISSE: ABC transporter, permease (IM), CBY-family (Cobalt uptake, unknown), Y179-subfamily (CBU-like systems). The function of CBU-like systems is unknown.
  
    0.552
AARI_27230
Creatininase catalyses the formation of creatine from creatinine.
  
     0.518
AARI_29650
5.2 Protein of unknown function similar to proteins from other organisms.
  
 
   0.515
AARI_28070
Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0.
       0.497
AARI_01070
Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily).
  
     0.473
AARI_28040
Iron-sulfur cluster binding protein; Identified by match to protein family TIGR00273.
       0.444
AARI_28050
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
       0.444
AARI_28030
Cysteine-rich domain-containing protein; Identified by match to PF02754. This domain is usually found in two copies per protein. It contains up to four conserved cysteines. The group includes proteins characterised as: heterodisulphide reductase, subunit B (HrdB); succinate dehydrogenase, subunit C (SdhC); Fe-S oxidoreductase; glycerol-3-phosphate dehydrogenase subunit C (Anaerobic GlpC, ); and glycolate oxidase iron-sulfur subunit (GlcF).
       0.419
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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