STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_28220Putative DNA-binding protein; Match to PF00376: MerR family regulatory protein. (129 aa)    
Predicted Functional Partners:
AARI_28230
Hypothetical membrane protein; 3 transmembrane helices predicted by TMHMM2.0.
       0.773
AARI_27000
Conserved hypothetical membrane protein; 6 transmembrane helices predicted by TMHMM2.0.
  
     0.735
AARI_24810
Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family.
  
     0.728
AARI_23540
Hypothetical membrane protein; 37 transmembrane helices predicted by TMHMM2.0.
  
     0.644
AARI_26990
Conserved hypothetical membrane protein; 7 transmembrane helices predicted by TMHMM2.0.
  
     0.626
AARI_03240
Conserved hypothetical membrane protein.
  
     0.607
AARI_12830
Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0.
  
     0.607
AARI_18120
Hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0.
  
     0.602
AARI_04890
Conserved hypothetical protein; 5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.591
AARI_01070
Putative MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily).
  
     0.589
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.