STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_29250Identified by match to PF00702. This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. (225 aa)    
Predicted Functional Partners:
AARI_27020
Match to protein family PF08282: haloacid dehalogenase-like hydrolase. The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification.
   
 0.642
AARI_29260
Identified by match to PF00702. This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases.
 
   
 0.641
glpF
Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically important processes. Belongs to the the Major Intrinsic Protein (MIP) family (TC 1.A.8.y.z).
   
 
 0.549
AARI_35650
Transposase of ISAar22, IS481 family.
       0.479
AARI_21260
Putative serine protease; 1 transmembrane helice predicted by TMHMM2.0.
 
 
  0.447
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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