STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_30410Conserved hypothetical membrane protein; 6 transmembrane helices predicted by TMHMM2.0. (467 aa)    
Predicted Functional Partners:
AARI_30420
Identified by match to protein family PF04261. This family of dye-decolourising peroxidases lack a typical heme-binding region.
    0.857
AARI_25740
Putative copper resistance protein C; Identified by match to protein family PF04234. CopC is a bacterial blue copper protein that binds 1 atom of copper per protein molecule. Along with CopA, CopC mediates copper resistance by sequestration of copper in the periplasm.
 
    0.757
AARI_30430
Conserved hypothetical secreted protein; Signal peptide predicted by SignalP 3.0 HMM (probability: 1.000) with cleavage site probability 0.655 between position 38 and 39.
 
    0.686
AARI_25720
Identified by match to protein family PF04261. This family of dye-decolourising peroxidases lack a typical heme-binding region.
    0.653
AARI_32880
L-ornithine 5-monooxygenase catalyzes the conversion of L-ornithine into N5-hydroxy-L-ornithine, which is later incorporated in the siderophore pyoverdin, produced by Pseudomonas aeruginosa.
 
    0.420
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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