STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_30850IclR-family transcriptional regulator; Identified by match to PF09339: IclR helix-turn-helix domain. This family of bacterial transcriptional regulators groups several proteins, including gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces, and iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium. (222 aa)    
Predicted Functional Partners:
AARI_06390
Putative allophanate hydrolase; Identified by match to PF02626 and PF02682. EC 3.5. 1.24 may be involved in the degradation of urea, together with EC 6.3.4.6, or in cyanuric acid metabolism.
  
    0.724
1.14.13.-
Match to PR00420: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature.
 
   
 0.626
AARI_04430
IclR-family transcriptional regulator; Identified by match to PF09339: IclR helix-turn-helix domain. This family of bacterial transcriptional regulators groups several proteins, including gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces, and iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium.
  
     0.599
AARI_04480
IclR-family transcriptional regulator; Identified by match to PF09339: IclR helix-turn-helix domain. This family of bacterial transcriptional regulators groups several proteins, including gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces, and iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium.
  
     0.577
AARI_31760
IclR-family transcriptional regulator; Identified by match to PF09339: IclR helix-turn-helix domain. This family of bacterial transcriptional regulators groups several proteins, including gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces, and iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium.
  
     0.536
AARI_27270
IclR-family transcriptional regulator; Identified by match to PF09339: IclR helix-turn-helix domain. This family of bacterial transcriptional regulators groups several proteins, including gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces, and iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium.
  
     0.531
AARI_31470
IclR-family transcriptional regulator; Identified by match to PF09339: IclR helix-turn-helix domain. This family of bacterial transcriptional regulators groups several proteins, including gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces, and iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium.
  
     0.519
cydDC
ATP-binding cassette, subfamily C, bacterial CydCD; TCDB: ATP-binding cassette (ABC) superfamily, CydDC cysteine exporter (CydDC-E) family (TC 3.A.1.129.z). ABCISSE: ABC transporter, permease and ATP-binding protein (IM-ABC)2, DPL-family, CYD-subfamily (Cytochrome bd biogenesis and cysteine export).
 
     0.435
AARI_28460
IclR-family transcriptional regulator; Identified by match to PF09339: IclR helix-turn-helix domain. This family of bacterial transcriptional regulators groups several proteins, including gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces, and iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium.
  
     0.434
AARI_13300
GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships.
  
    0.401
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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