Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AARI_30880 | AARI_30890 | AARI_30880 | AARI_30890 | MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | Match to protein domain PF09424. This domain is found in GatB and proteins related to bacterial Yqey. GatB transamidates Glu-tRNA to Gln-tRNA. The function of this domain is uncertain, but Yqey and its relatives may have a role in tRNA metabolism. | 0.523 |
| AARI_30890 | AARI_30880 | AARI_30890 | AARI_30880 | Match to protein domain PF09424. This domain is found in GatB and proteins related to bacterial Yqey. GatB transamidates Glu-tRNA to Gln-tRNA. The function of this domain is uncertain, but Yqey and its relatives may have a role in tRNA metabolism. | MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690 (Major Facilitator Superfamily). | 0.523 |
| AARI_30890 | AARI_30900 | AARI_30890 | AARI_30900 | Match to protein domain PF09424. This domain is found in GatB and proteins related to bacterial Yqey. GatB transamidates Glu-tRNA to Gln-tRNA. The function of this domain is uncertain, but Yqey and its relatives may have a role in tRNA metabolism. | Hypothetical secreted protein; Signal peptide predicted by SignalP 3.0 HMM (probability: 0.593) with cleavage site probability 0.268 between position 39 and 40. | 0.540 |
| AARI_30890 | rpmE2 | AARI_30890 | AARI_16010 | Match to protein domain PF09424. This domain is found in GatB and proteins related to bacterial Yqey. GatB transamidates Glu-tRNA to Gln-tRNA. The function of this domain is uncertain, but Yqey and its relatives may have a role in tRNA metabolism. | Part of the 50S ribosomal subunit. | 0.448 |
| AARI_30890 | rpsO | AARI_30890 | AARI_10320 | Match to protein domain PF09424. This domain is found in GatB and proteins related to bacterial Yqey. GatB transamidates Glu-tRNA to Gln-tRNA. The function of this domain is uncertain, but Yqey and its relatives may have a role in tRNA metabolism. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.509 |
| AARI_30900 | AARI_30890 | AARI_30900 | AARI_30890 | Hypothetical secreted protein; Signal peptide predicted by SignalP 3.0 HMM (probability: 0.593) with cleavage site probability 0.268 between position 39 and 40. | Match to protein domain PF09424. This domain is found in GatB and proteins related to bacterial Yqey. GatB transamidates Glu-tRNA to Gln-tRNA. The function of this domain is uncertain, but Yqey and its relatives may have a role in tRNA metabolism. | 0.540 |
| rpmE2 | AARI_30890 | AARI_16010 | AARI_30890 | Part of the 50S ribosomal subunit. | Match to protein domain PF09424. This domain is found in GatB and proteins related to bacterial Yqey. GatB transamidates Glu-tRNA to Gln-tRNA. The function of this domain is uncertain, but Yqey and its relatives may have a role in tRNA metabolism. | 0.448 |
| rpmE2 | rpsO | AARI_16010 | AARI_10320 | Part of the 50S ribosomal subunit. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.994 |
| rpsO | AARI_30890 | AARI_10320 | AARI_30890 | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | Match to protein domain PF09424. This domain is found in GatB and proteins related to bacterial Yqey. GatB transamidates Glu-tRNA to Gln-tRNA. The function of this domain is uncertain, but Yqey and its relatives may have a role in tRNA metabolism. | 0.509 |
| rpsO | rpmE2 | AARI_10320 | AARI_16010 | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | Part of the 50S ribosomal subunit. | 0.994 |