Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AARI_31050 | AARI_31070 | AARI_31050 | AARI_31070 | Hypothetical membrane protein; 6 transmembrane helices predicted by TMHMM2.0. | Major facilitator superfamily (MFS), metabolite:H+ symporter (MHS) family (TC 2.A.1.6.z). | 0.535 |
| AARI_31050 | lldD | AARI_31050 | AARI_31060 | Hypothetical membrane protein; 6 transmembrane helices predicted by TMHMM2.0. | L-lactate dehydrogenase (cytochrome); Catalyses the conversion of L-lactate to pyruvate. Probable quinone-dependent lactate dehydrogenase, functionning when lactate is used as a carbon and energy source. | 0.614 |
| AARI_31070 | AARI_31050 | AARI_31070 | AARI_31050 | Major facilitator superfamily (MFS), metabolite:H+ symporter (MHS) family (TC 2.A.1.6.z). | Hypothetical membrane protein; 6 transmembrane helices predicted by TMHMM2.0. | 0.535 |
| AARI_31070 | AARI_31080 | AARI_31070 | AARI_31080 | Major facilitator superfamily (MFS), metabolite:H+ symporter (MHS) family (TC 2.A.1.6.z). | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | 0.596 |
| AARI_31070 | lldD | AARI_31070 | AARI_31060 | Major facilitator superfamily (MFS), metabolite:H+ symporter (MHS) family (TC 2.A.1.6.z). | L-lactate dehydrogenase (cytochrome); Catalyses the conversion of L-lactate to pyruvate. Probable quinone-dependent lactate dehydrogenase, functionning when lactate is used as a carbon and energy source. | 0.731 |
| AARI_31080 | AARI_31070 | AARI_31080 | AARI_31070 | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | Major facilitator superfamily (MFS), metabolite:H+ symporter (MHS) family (TC 2.A.1.6.z). | 0.596 |
| AARI_31080 | lldD | AARI_31080 | AARI_31060 | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | L-lactate dehydrogenase (cytochrome); Catalyses the conversion of L-lactate to pyruvate. Probable quinone-dependent lactate dehydrogenase, functionning when lactate is used as a carbon and energy source. | 0.483 |
| lldD | AARI_31050 | AARI_31060 | AARI_31050 | L-lactate dehydrogenase (cytochrome); Catalyses the conversion of L-lactate to pyruvate. Probable quinone-dependent lactate dehydrogenase, functionning when lactate is used as a carbon and energy source. | Hypothetical membrane protein; 6 transmembrane helices predicted by TMHMM2.0. | 0.614 |
| lldD | AARI_31070 | AARI_31060 | AARI_31070 | L-lactate dehydrogenase (cytochrome); Catalyses the conversion of L-lactate to pyruvate. Probable quinone-dependent lactate dehydrogenase, functionning when lactate is used as a carbon and energy source. | Major facilitator superfamily (MFS), metabolite:H+ symporter (MHS) family (TC 2.A.1.6.z). | 0.731 |
| lldD | AARI_31080 | AARI_31060 | AARI_31080 | L-lactate dehydrogenase (cytochrome); Catalyses the conversion of L-lactate to pyruvate. Probable quinone-dependent lactate dehydrogenase, functionning when lactate is used as a carbon and energy source. | GntR-family transcriptional regulator; Identified by match to protein family PF00392. This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins can be divided into six sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. | 0.483 |