STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dgoTD-galactonate transporter; Major facilitator superfamily (MFS), Anion:Cation Symporter (ACS) Family, galactonate uptake (TC 2.A.1.14.7). (440 aa)    
Predicted Functional Partners:
dgoD
Galactonate dehydratase; Catalyzes the first reaction in the D-galactonate catabolic pathway.
 
   
 0.910
dgoA
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the third reaction in the D-galactonate catabolic pathway.
 
   
 0.904
dgoK
2-dehydro-3-deoxygalactonokinase; Catalyzes the second reaction in the D-galactonate catabolic pathway.
 
  
 0.874
AARI_31760
IclR-family transcriptional regulator; Identified by match to PF09339: IclR helix-turn-helix domain. This family of bacterial transcriptional regulators groups several proteins, including gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces, and iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium.
 
    0.560
AARI_31700
Putative ATP-dependent helicase; Possible DNA or RNA helicase.
       0.435
AARI_31710
NUDIX domain-containing protein; Identified by match to PF00293. Members of the Nudix hydrolase superfamily catalyze the hydrolysis of nucleoside diphosphates linked to other moieties. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools an [...]
       0.435
AARI_31490
MFS superfamily transporter; Major facilitator superfamily (TC 2.A.1.y.z). Identified by match to protein family PF07690.
  
    0.404
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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