STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_32510Carbonate dehydratases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide. They are ubiquitous enzymes involved in fundamental processes like respiration, pH homeostasis and ion transport. Signal peptide predicted by SignalP 3.0 HMM (probability: 0.975) with cleavage site probability 0.621 between position 42 and 43. (260 aa)    
Predicted Functional Partners:
AARI_07620
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 
0.912
AARI_07030
Match to PF00132: Bacterial transferase hexapeptide repeat. A number of different transferase protein families contain this repeat, such as galactoside acetyltransferase-like proteins, the gamma-class of carbonic anhydrases, and tetrahydrodipicolinate-N-succinlytransferases.
    
 
 0.781
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.572
AARI_32530
Acetyl-/propionyl-coenzyme A carboxylase beta chain; Enzymes named acetyl-coenzyme A carboxylase (EC 6.4. 1.2), propionyl-coenzyme A carboxylase (EC 6.4.1.3) and acyl-coenzyme A carboxylase are constituted by several types of subunits. Alpha subunits contains the biotin carboxylase (BC, EC 6.3.4.14) and biotin carboxyl carrier protein (BCCP) domains, beta subunits contain the carboxyltransferase (CT) domain. An epsilon subunit is present in some microorganisms.
     
 0.483
AARI_32560
Putative citrate lyase beta subunit; Citrate lyase catalyses the formation of acetate and oxaloacetate from citrate; Belongs to the HpcH/HpaI aldolase family.
       0.439
AARI_32520
TetR-family transcriptional regulator; Identified by match to PF00440: bacterial regulatory proteins, tetR family.
       0.433
accA
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Enzymes named acetyl-coenzyme A carboxylase (EC 6.4. 1.2), propionyl-coenzyme A carboxylase (EC 6.4.1.3) and acyl-coenzyme A carboxylase are constituted by several types of subunits. Alpha subunits contains the biotin carboxylase (BC, EC 6.3.4.14) and biotin carboxyl carrier protein (BCCP) domains, beta subunits contain the carboxyltransferase (CT) domain. An epsilon subunit is present in some microorganisms.
  
    0.426
AARI_32550
MaoC like domain-containing protein; Match to PF01575. Several bacterial proteins that are composed solely of this domain have (R)-specific enoyl-CoA hydratase activity.
       0.420
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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