STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARI_35560Transposase of ISAar11, IS1380 family. (478 aa)    
Predicted Functional Partners:
AARI_13910
Match to protein family PF02706. This family includes proteins involved in lipopolysaccharide (lps) biosynthesis.
 
 
 0.752
AARI_21620
Conserved hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.588
AARI_14520
TC 3.A.1.y.z. ABCISSE: ABC transporter, ATP-binding protein (ABC), CLS-family (capsular polysaccharide, lipopolysaccharide and teichoic acids). A typical system is made of a conserved permease (IM) and an ATP-binding subunit (ABC). In addition to these proteins, capsular polysaccharide exporter systems require two accessory proteins to perform their function: a periplasmic or a lipid-anchored outer membrane protein called OMA and a cytoplasmic membrane protein MPA2.
  
  
 0.548
AARI_14510
TC 3.A.1.y.z. ABCISSE: ABC transporter, permease (IM), CLS-family (capsular polysaccharide, lipopolysaccharide and teichoic acids). A typical system is made of a conserved permease (IM) and an ATP-binding subunit (ABC). In addition to these proteins, capsular polysaccharide exporter systems require two accessory proteins to perform their function: a periplasmic or a lipid-anchored outer membrane protein called OMA and a cytoplasmic membrane protein MPA2.
  
  
 0.545
AARI_35130
Transposase of ISAar21, IS4 family, IS4 group.
  
     0.524
AARI_35210
Transposase of ISAar21, IS4 family, IS4 group.
  
     0.524
AARI_13870
Putative sugar transferase; Match to protein family PF02397. This entry represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways. Examples include galactosyl-P-P-undecaprenol synthetase (EC:2.7.8.6), which transfers galatose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O-polysaccharide biosynthesis; UDP-galactose-lipid carrier transferase, which is involved in the biosynthesis of amylovoran; and galactosyl transferase CpsD, which is essential for assembly of the group B Streptococ [...]
  
  
 0.484
AARI_18120
Hypothetical membrane protein; 1 transmembrane helice predicted by TMHMM2.0.
  
     0.479
AARI_11330
Putative GNAT-family acetyltransferase; Identified by match to PF00583: acetyltransferase (GNAT) family.
  
     0.466
AARI_10420
Hypothetical membrane protein; 2 transmembrane helices predicted by TMHMM2.0.
 
     0.451
Your Current Organism:
Glutamicibacter arilaitensis
NCBI taxonomy Id: 861360
Other names: Arthrobacter arilaitensis CIP 108037, Arthrobacter arilaitensis Re117, G. arilaitensis Re117, Glutamicibacter arilaitensis Re117
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