STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM44050.1Sporulation protein YtfJ; Psort location: Cytoplasmic, score: 8.96. (141 aa)    
Predicted Functional Partners:
EHM44049.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.803
EHM44048.1
Oxidoreductase, FAD/FMN-binding protein; KEGG: tye:THEYE_A1149 9.7e-60 NADH oxidase; Psort location: Cytoplasmic, score: 9.97.
       0.565
EHM44051.1
Outer membrane protein.
       0.520
EHM38811.1
ATPase, AAA family; KEGG: tjr:TherJR_2973 4.3e-121 sigma 54 interacting domain protein K01338; Psort location: Cytoplasmic, score: 8.96.
  
    0.509
EHM38792.1
Hypothetical protein; KEGG: pfr:PFREUD_10120 5.9e-11 exopolysaccharide biosynthesis protein precursor (related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase precursor); Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.486
EHM44040.1
Hypothetical protein.
  
     0.415
EHM43147.1
KEGG: cpo:COPRO5265_0237 8.0e-43 cobalt import ATP-binding protein CbiO 1 K02006; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.410
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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