STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM44066.1DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (371 aa)    
Predicted Functional Partners:
EHM41646.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.999
EHM40369.1
KEGG: vpr:Vpar_0959 2.8e-12 DNA polymerase III delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.999
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
 0.999
dnaA
Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 0.997
EHM42171.1
D-proline reductase, PrdA proprotein; KEGG: cdc:CD196_3054 1.5e-61 hypothetical protein; K10795 D-proline reductase (dithiol) PrdD; Psort location: Cytoplasmic, score: 9.97.
   
 0.989
EHM39243.1
KEGG: tte:TTE0254 6.7e-52 dinP; DNA polymerase IV; K02346 DNA polymerase IV; Psort location: Cytoplasmic, score: 9.26; overlaps another CDS with the same product name.
   
 0.989
EHM39244.1
DNA polymerase IV domain protein; KEGG: pca:Pcar_3129 3.9e-24 dinP; damage-inducible protein DinP; K02346 DNA polymerase IV; overlaps another CDS with the same product name.
   
 0.989
EHM37826.1
Hypothetical protein; KEGG: cba:CLB_2345 2.8e-37 prdD; PrdD protein; K10795 D-proline reductase (dithiol) PrdD; Psort location: Cytoplasmic, score: 9.97.
   
 0.989
EHM39435.1
Hypothetical protein; KEGG: bcz:BCZK3528 5.7e-14 mutS; DNA mismatch repair protein MutS K03555.
  
 0.986
EHM39436.1
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA.
   
 0.984
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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