STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM42472.1Tat pathway signal sequence domain protein; KEGG: cpf:CPF_0545 3.5e-23 putative N-acetylmuramoyl-L-alanine amidase; K01447 N-acetylmuramoyl-L-alanine amidase. (193 aa)    
Predicted Functional Partners:
EHM44056.1
KEGG: mta:Moth_1058 1.1e-40 serine-type D-Ala-D-Ala carboxypeptidase K07258; Psort location: CytoplasmicMembrane, score: 9.82.
     
 0.546
EHM39092.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: vpr:Vpar_0281 1.3e-64 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.97.
     
 0.546
EHM43374.1
Hypothetical protein; KEGG: mbu:Mbur_2385 1.3e-08 D-3-phosphoglycerate dehydrogenase K00058.
  
     0.540
EHM38807.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.508
EHM37986.1
Hexokinase; KEGG: drm:Dred_1810 2.8e-53 hexokinase K00844; Psort location: Cytoplasmic, score: 8.96.
  
     0.467
EHM38656.1
Hypothetical protein.
  
     0.463
EHM39241.1
NlpC/P60 family protein; KEGG: bmq:BMQ_1654 1.8e-42 lytF; endopeptidase LytF (cell wall hydrolase).
  
  
 0.461
EHM42473.1
Hypothetical protein.
     
 0.446
EHM42474.1
ErfK/YbiS/YcfS/YnhG; KEGG: syg:sync_1728 2.1e-08 ATP synthase.
     
 0.446
EHM43105.1
Hypothetical protein; KEGG: ctc:CTC00344 7.2e-14 uridine kinase K00876; Psort location: Cytoplasmic, score: 8.96.
  
     0.438
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.