STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM42280.1Hypothetical protein. (88 aa)    
Predicted Functional Partners:
EHM42279.1
Selenium metabolism protein YedF; KEGG: rpe:RPE_3727 0.00014 SirA-like; K04085 tRNA 2-thiouridine synthesizing protein A; Psort location: Cytoplasmic, score: 8.96; Belongs to the sulfur carrier protein TusA family.
       0.787
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
       0.659
EHM42276.1
Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.491
EHM42277.1
KEGG: apb:SAR116_1204 1.3e-19 phosphate ABC transporter permease protein K02038; Psort location: CytoplasmicMembrane, score: 10.00.
       0.491
EHM42278.1
KEGG: cbi:CLJ_B0445 4.2e-59 phosphate import ATP-binding protein PstB; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the ABC transporter superfamily.
       0.491
EHM42282.1
2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: cbh:CLC_3155 1.8e-131 putative R-2-hydroxyglutaryl-CoA dehydratase subunit; Psort location: Cytoplasmic, score: 8.96.
       0.406
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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