STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM42177.1Amino acid permease; KEGG: eci:UTI89_C0120 3.3e-13 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00. (459 aa)    
Predicted Functional Partners:
EHM42178.1
Creatinase; KEGG: clj:CLJU_c29640 5.6e-119 pepQ2; Xaa-Pro dipeptidase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.674
EHM43837.1
KEGG: afn:Acfer_1608 1.0e-64 prephenate dehydratase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97.
   
 0.636
EHM40399.1
KEGG: toc:Toce_1803 3.1e-127 L-threonine ammonia-lyase K01754; Psort location: Cytoplasmic, score: 9.97.
  
  0.560
EHM42176.1
Elongation factor SelB, winged helix; KEGG: clj:CLJU_c07480 4.8e-12 selenocysteine-specific translation elongation factor K03833; Psort location: Cytoplasmic, score: 8.96.
       0.529
EHM41330.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
   
 0.519
EHM42453.1
KEGG: bde:BDP_1067 1.7e-158 amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
   0.513
EHM39085.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 1.3e-96 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.490
EHM42175.1
KEGG: clj:CLJU_c27700 4.8e-106 selenocysteine-specific translation elongation factor K03833; Psort location: Cytoplasmic, score: 9.97.
       0.471
gatA
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
   
 0.471
EHM42179.1
Ornithine cyclodeaminase/mu-crystallin family protein; KEGG: cbf:CLI_2638 9.1e-80 ornithine cyclodeaminase; K01750 ornithine cyclodeaminase; Psort location: Cytoplasmic, score: 9.97.
       0.464
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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