STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM42004.1Hypothetical protein; KEGG: rcp:RCAP_rcc03384 2.8e-05 emrA; multidrug resistance protein A K03543; Psort location: CytoplasmicMembrane, score: 9.82. (206 aa)    
Predicted Functional Partners:
EHM41838.1
Hypothetical protein.
     0.986
EHM42001.1
ABC-2 type transporter; KEGG: har:HEAR2591 3.6e-34 rbbA; ribosome-associated ATPase K13926; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.975
EHM42002.1
ABC-2 type transporter; KEGG: har:HEAR2591 2.8e-34 rbbA; ribosome-associated ATPase K13926; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.974
EHM42869.1
KEGG: vap:Vapar_4267 8.8e-11 RND efflux system, outer membrane lipoprotein, NodT family K00694; Psort location: OuterMembrane, score: 10.00.
 
 0.965
EHM42003.1
KEGG: noc:Noc_1779 7.2e-135 ABC transporter, ATPase subunit K01990.
  
 0.955
EHM38654.1
Efflux ABC transporter, permease protein; KEGG: gme:Gmet_3036 1.2e-102 hypothetical protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.794
EHM42000.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.710
EHM44090.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 3.1e-19 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.632
EHM38671.1
KEGG: cbi:CLJ_B2767 7.7e-99 glycosyl transferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.16.
  
 
 0.617
EHM40383.1
Putative multidrug efflux pump BpeF; KEGG: rcp:RCAP_rcc02895 5.2e-187 mdtF; multidrug resistance protein MdtF; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.614
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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