STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM41113.1KEGG: sds:SDEG_0016 7.6e-76 amino acid permease K03294; Psort location: CytoplasmicMembrane, score: 10.00. (468 aa)    
Predicted Functional Partners:
EHM43837.1
KEGG: afn:Acfer_1608 1.0e-64 prephenate dehydratase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97.
   
 0.636
EHM41114.1
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
     
 0.561
EHM40399.1
KEGG: toc:Toce_1803 3.1e-127 L-threonine ammonia-lyase K01754; Psort location: Cytoplasmic, score: 9.97.
  
  0.560
EHM41330.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
   
 0.519
EHM41112.1
Hypothetical protein.
       0.486
gatA
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
   
 0.471
EHM37215.1
KEGG: ssm:Spirs_2638 2.4e-182 aldehyde dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.461
EHM41115.1
KEGG: dae:Dtox_3089 3.8e-26 L-threonine-O-3-phosphate decarboxylase; K04720 threonine-phosphate decarboxylase.
    
  0.460
EHM41116.1
KEGG: slp:Slip_0933 1.3e-34 L-threonine-O-3-phosphate decarboxylase; K04720 threonine-phosphate decarboxylase; Psort location: Cytoplasmic, score: 9.97.
    
  0.458
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
   
 0.433
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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