STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM40117.1Mur ligase family, catalytic domain protein; KEGG: swo:Swol_0821 3.8e-10 UDP-N-acetylmuramyl-tripeptide synthetases; K01928 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. (89 aa)    
Predicted Functional Partners:
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.986
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
     0.984
EHM40122.1
Putative UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; KEGG: vpr:Vpar_1114 2.0e-61 UDP-N-acetylmuramoylalanine/D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
 
 0.956
EHM40123.1
KEGG: afn:Acfer_1303 6.3e-40 UDP-N-acetylmuramoylalanine/D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.947
EHM40120.1
Putative phospho-N-acetylmuramoyl-pentapeptide-transferase; KEGG: vpr:Vpar_1115 1.6e-52 phospho-N-acetylmuramoyl-pentapeptide-transferas E; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.937
EHM40121.1
Hypothetical protein; KEGG: toc:Toce_0949 4.9e-09 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.889
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 0.852
ddl
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
 
 0.850
EHM42880.1
Putative diaminopimelate decarboxylase; KEGG: vpr:Vpar_1032 4.0e-157 Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 9.97.
     
 0.811
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
 
 0.809
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.