STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM38763.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
EHM39758.1
Hypothetical protein; Belongs to the UPF0297 family.
  
     0.747
EHM43266.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.739
EHM38840.1
Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: eam:EAMY_1232 1.3e-05 bglX1; beta-D-glucoside glucohydrolase, periplasmic; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.627
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
  
 0.574
EHM43715.1
KEGG: bpb:bpr_I2409 5.6e-24 tig; trigger factor Tig K03545; Psort location: Cytoplasmic, score: 8.96.
  
     0.541
EHM41100.1
Hypothetical protein; KEGG: spb:M28_Spy0711 9.0e-25 anthranilate synthase component I K06967; Psort location: Cytoplasmic, score: 8.96.
  
     0.528
EHM42183.1
KEGG: apb:SAR116_1597 1.3e-11 integral membrane protein MviN K03980; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.505
EHM39731.1
Helix-turn-helix protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.478
EHM38806.1
Hypothetical protein; KEGG: drm:Dred_1938 1.1e-49 beta-lactamase domain-containing protein; K12574 ribonuclease J; Psort location: Cytoplasmic, score: 8.96.
 
     0.462
EHM41313.1
Putative stage V sporulation protein B; KEGG: jan:Jann_0247 0.0014 undecaprenyl pyrophosphate phosphatase K06153; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.456
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.