STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM38790.1Polysaccharide deacetylase; KEGG: bao:BAMF_3715 1.3e-14 yxkH; putative exported polysaccharide deacetylase, lipoprotein. (200 aa)    
Predicted Functional Partners:
EHM38791.1
Hypothetical protein; KEGG: tit:Thit_2259 1.6e-06 polysaccharide deacetylase; K11931 biofilm PGA synthesis lipoprotein PgaB.
      0.910
EHM38792.1
Hypothetical protein; KEGG: pfr:PFREUD_10120 5.9e-11 exopolysaccharide biosynthesis protein precursor (related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase precursor); Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.849
EHM38671.1
KEGG: cbi:CLJ_B2767 7.7e-99 glycosyl transferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.16.
  
 
 0.818
EHM38789.1
KEGG: gbe:GbCGDNIH1_0049 3.0e-40 glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.778
EHM38793.1
Hypothetical protein.
       0.763
EHM38794.1
Hypothetical protein.
       0.752
EHM38795.1
Universal stress family protein.
       0.726
EHM38796.1
Putative high-affinity zinc transporter ATPase; KEGG: afn:Acfer_0086 1.1e-60 ABC transporter related protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
       0.463
EHM40761.1
KEGG: pjd:Pjdr2_0838 1.6e-217 glycoside hydrolase family 3 domain protein; K05349 beta-glucosidase.
     
 0.458
EHM38797.1
KEGG: apb:SAR116_2225 3.3e-27 ABC transporter, membrane spanning protein, zinc K09816; Psort location: CytoplasmicMembrane, score: 10.00.
       0.456
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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