STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM38590.1TonB-dependent receptor plug domain protein; KEGG: ddd:Dda3937_04300 1.5e-12 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 9.92. (561 aa)    
Predicted Functional Partners:
EHM38591.1
TonB-dependent receptor; KEGG: ccv:CCV52592_1811 7.6e-10 diaminopimelate epimerase (DAP epimerase).
     0.957
EHM40274.1
Hypothetical protein; KEGG: ddd:Dda3937_04300 2.0e-05 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014.
 
     0.837
EHM37552.1
Outer membrane insertion signal domain protein; KEGG: ccv:CCV52592_1811 0.0018 diaminopimelate epimerase (DAP epimerase); Psort location: OuterMembrane, score: 9.49.
 
     0.791
EHM43127.1
Putative selenium-dependent hydroxylase accessory protein YqeC; Psort location: Cytoplasmic, score: 8.96.
  
     0.716
EHM38592.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
      0.702
EHM39596.1
Hep/Hag repeat protein; KEGG: eci:UTI89_C4143 1.1e-20 putative autotransport adhesin; overlaps another CDS with the same product name.
  
     0.617
EHM42653.1
TonB-dependent receptor; KEGG: dya:Dyak_GE16198 1.1e-06 GE16198 gene product from transcript GE16198-RA; K13761 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9.
   
 
 0.569
EHM42655.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: hip:CGSHiEE_01075 9.9e-07 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.550
EHM42656.1
TIGR03943 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.548
EHM38639.1
Tat pathway signal sequence domain protein; KEGG: cco:CCC13826_1974 3.7e-106 hsdM; type I restriction-modification system, M subunit K02020.
  
     0.502
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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